{"_id":"58458e07e055290f00c029ca","parentDoc":null,"project":"55faf11ba62ba1170021a9a7","__v":0,"category":{"_id":"58458b4fba4f1c0f009692bb","project":"55faf11ba62ba1170021a9a7","version":"55faf11ba62ba1170021a9aa","__v":0,"sync":{"url":"","isSync":false},"reference":false,"createdAt":"2016-12-05T15:44:15.650Z","from_sync":false,"order":6,"slug":"datasets-hub","title":"DATASETS HUB"},"user":"5613e4f8fdd08f2b00437620","version":{"_id":"55faf11ba62ba1170021a9aa","project":"55faf11ba62ba1170021a9a7","__v":38,"createdAt":"2015-09-17T16:58:03.490Z","releaseDate":"2015-09-17T16:58:03.490Z","categories":["55faf11ca62ba1170021a9ab","55faf8f4d0e22017005b8272","55faf91aa62ba1170021a9b5","55faf929a8a7770d00c2c0bd","55faf932a8a7770d00c2c0bf","55faf94b17b9d00d00969f47","55faf958d0e22017005b8274","55faf95fa8a7770d00c2c0c0","55faf96917b9d00d00969f48","55faf970a8a7770d00c2c0c1","55faf98c825d5f19001fa3a6","55faf99aa62ba1170021a9b8","55faf99fa62ba1170021a9b9","55faf9aa17b9d00d00969f49","55faf9b6a8a7770d00c2c0c3","55faf9bda62ba1170021a9ba","5604570090ee490d00440551","5637e8b2fbe1c50d008cb078","5649bb624fa1460d00780add","5671974d1b6b730d008b4823","5671979d60c8e70d006c9760","568e8eef70ca1f0d0035808e","56d0a2081ecc471500f1795e","56d4a0adde40c70b00823ea3","56d96b03dd90610b00270849","56fbb83d8f21c817002af880","573c811bee2b3b2200422be1","576bc92afb62dd20001cda85","5771811e27a5c20e00030dcd","5785191af3a10c0e009b75b0","57bdf84d5d48411900cd8dc0","57ff5c5dc135231700aed806","5804caf792398f0f00e77521","58458b4fba4f1c0f009692bb","586d3c287c6b5b2300c05055","58ef66d88646742f009a0216","58f5d52d7891630f00fe4e77","59a555bccdbd85001bfb1442"],"is_deprecated":false,"is_hidden":false,"is_beta":true,"is_stable":true,"codename":"","version_clean":"1.0.0","version":"1.0"},"updates":[],"next":{"pages":[],"description":""},"createdAt":"2016-12-05T15:55:51.052Z","link_external":false,"link_url":"","githubsync":"","sync_unique":"","hidden":false,"api":{"results":{"codes":[]},"settings":"","auth":"required","params":[],"url":""},"isReference":false,"order":5,"body":"The Cancer Cell Line Encyclopedia (CCLE) contains Open Access sequencing data for nearly 1000 cancer cell line samples. The CCLE is made possible through a collaboration between the <a href=\"https://www.broadinstitute.org/\" target=\"blank\">Broad Institute</a>, the <a href=\"https://www.nibr.com/\" target=\"blank\">Novartis Institutes for Biomedical Research</a>, and the <a href=\"https://www.gnf.nibr.com/\" target=\"blank\">Genomics Institute of the Novartis Research Foundation</a>.\n\nData from the CCLE is available on the CGC via a [public project](public-project-overview), which acts as a repository for data as well as for examples of specific analyses and the tools you need to replicate these analyses. You can copy any CCLE data into your own projects, where you can analyze it. You don't need special access or authorization status to use the data available in the CCLE project.\n\nThe CCLE public project contains the following distribution of samples and files by experimental strategy.\n\nThe CCLE dataset is termed \"legacy\" in accordance with the distinction GDC makes between harmonized and non-harmonized datasets. Learn more about [legacy datasets](doc:about-datasets).\n[block:image]\n{\n  \"images\": [\n    {\n      \"image\": [\n        \"https://files.readme.io/304d808-Screen_Shot_2016-06-14_at_12.18.03_PM.png\",\n        \"Screen Shot 2016-06-14 at 12.18.03 PM.png\",\n        1270,\n        356,\n        \"#c8c8c8\"\n      ]\n    }\n  ]\n}\n[/block]\n[Browse](browse-datasets) and [query](query-datasets) the CCLE dataset. Or, access a repository of CCLE files via the [CCLE public project](ccle).","excerpt":"<a href=\"about-datasets\" style=\"color:#132c56\">ABOUT DATASETS</a> > CCLE data","slug":"ccle-data","type":"basic","title":"CCLE data"}

CCLE data

<a href="about-datasets" style="color:#132c56">ABOUT DATASETS</a> > CCLE data

The Cancer Cell Line Encyclopedia (CCLE) contains Open Access sequencing data for nearly 1000 cancer cell line samples. The CCLE is made possible through a collaboration between the <a href="https://www.broadinstitute.org/" target="blank">Broad Institute</a>, the <a href="https://www.nibr.com/" target="blank">Novartis Institutes for Biomedical Research</a>, and the <a href="https://www.gnf.nibr.com/" target="blank">Genomics Institute of the Novartis Research Foundation</a>. Data from the CCLE is available on the CGC via a [public project](public-project-overview), which acts as a repository for data as well as for examples of specific analyses and the tools you need to replicate these analyses. You can copy any CCLE data into your own projects, where you can analyze it. You don't need special access or authorization status to use the data available in the CCLE project. The CCLE public project contains the following distribution of samples and files by experimental strategy. The CCLE dataset is termed "legacy" in accordance with the distinction GDC makes between harmonized and non-harmonized datasets. Learn more about [legacy datasets](doc:about-datasets). [block:image] { "images": [ { "image": [ "https://files.readme.io/304d808-Screen_Shot_2016-06-14_at_12.18.03_PM.png", "Screen Shot 2016-06-14 at 12.18.03 PM.png", 1270, 356, "#c8c8c8" ] } ] } [/block] [Browse](browse-datasets) and [query](query-datasets) the CCLE dataset. Or, access a repository of CCLE files via the [CCLE public project](ccle).