{"__v":19,"_id":"56268b68b1c2630d00b112b2","category":{"__v":3,"_id":"55faf94b17b9d00d00969f47","pages":["56268b68b1c2630d00b112b2","56268b769ef9ea0d00292356","56d4984273dcd20b00fb86a9"],"project":"55faf11ba62ba1170021a9a7","version":"55faf11ba62ba1170021a9aa","sync":{"url":"","isSync":false},"reference":false,"createdAt":"2015-09-17T17:32:59.805Z","from_sync":false,"order":12,"slug":"find-apps","title":"FIND APPS"},"parentDoc":null,"project":"55faf11ba62ba1170021a9a7","user":"5613e4f8fdd08f2b00437620","version":{"__v":37,"_id":"55faf11ba62ba1170021a9aa","project":"55faf11ba62ba1170021a9a7","createdAt":"2015-09-17T16:58:03.490Z","releaseDate":"2015-09-17T16:58:03.490Z","categories":["55faf11ca62ba1170021a9ab","55faf8f4d0e22017005b8272","55faf91aa62ba1170021a9b5","55faf929a8a7770d00c2c0bd","55faf932a8a7770d00c2c0bf","55faf94b17b9d00d00969f47","55faf958d0e22017005b8274","55faf95fa8a7770d00c2c0c0","55faf96917b9d00d00969f48","55faf970a8a7770d00c2c0c1","55faf98c825d5f19001fa3a6","55faf99aa62ba1170021a9b8","55faf99fa62ba1170021a9b9","55faf9aa17b9d00d00969f49","55faf9b6a8a7770d00c2c0c3","55faf9bda62ba1170021a9ba","5604570090ee490d00440551","5637e8b2fbe1c50d008cb078","5649bb624fa1460d00780add","5671974d1b6b730d008b4823","5671979d60c8e70d006c9760","568e8eef70ca1f0d0035808e","56d0a2081ecc471500f1795e","56d4a0adde40c70b00823ea3","56d96b03dd90610b00270849","56fbb83d8f21c817002af880","573c811bee2b3b2200422be1","576bc92afb62dd20001cda85","5771811e27a5c20e00030dcd","5785191af3a10c0e009b75b0","57bdf84d5d48411900cd8dc0","57ff5c5dc135231700aed806","5804caf792398f0f00e77521","58458b4fba4f1c0f009692bb","586d3c287c6b5b2300c05055","58ef66d88646742f009a0216","58f5d52d7891630f00fe4e77"],"is_deprecated":false,"is_hidden":false,"is_beta":true,"is_stable":true,"codename":"","version_clean":"1.0.0","version":"1.0"},"updates":[],"next":{"pages":[],"description":""},"createdAt":"2015-10-20T18:43:52.375Z","link_external":false,"link_url":"","githubsync":"","sync_unique":"","hidden":false,"api":{"results":{"codes":[]},"settings":"","auth":"required","params":[],"url":""},"isReference":false,"order":0,"body":"The CGC offers a repository of publicly available apps suitable for many different types of data analysis.\n[block:callout]\n{\n  \"type\": \"warning\",\n  \"title\": \"On this page:\",\n  \"body\": \"* [Overview](#overview)\\n* [Accessing Public Apps](#accessing)\"\n}\n[/block]\n<a name=\"overview\"></a>\n##Overview\nApps include both **tools** (individual bioinformatics utilities) and **workflows** (chains or pipelines of connected tools). The publicly available apps are maintained by the CGC bioinformatics team to represent the latest tool versions.\n\nThey can be fully modified using the [tool editor](doc:edit-a-tool) and the [workflow editor](doc:the-pipeline-editor).\n\nThe CGC public apps are hosted in a gallery for you to locate them easily. Once you access the public apps gallery, you can:\n\n1. [Search for a specific app](doc:search-for-an-app).\n2. Explore all apps.\n3. View featured apps.\n[block:image]\n{\n  \"images\": [\n    {\n      \"image\": [\n        \"https://files.readme.io/9259974-cgc-pub-apps1.jpg\",\n        \"cgc-pub-apps1.jpg\",\n        1073,\n        986,\n        \"#ededed\"\n      ],\n      \"border\": true\n    }\n  ]\n}\n[/block]\n<div align=\"right\"><a href=\"#top\">top</a></div>\n\n<a name=\"accessing\"></a>\n##Accessing Public Apps\n\nTo view the public apps gallery, click **Public Apps** in the top navigation bar.\n[block:image]\n{\n  \"images\": [\n    {\n      \"image\": [\n        \"https://files.readme.io/bef90d8-access-pub-apps.jpg\",\n        \"access-pub-apps.jpg\",\n        680,\n        409,\n        \"#3461a5\"\n      ],\n      \"border\": true\n    }\n  ]\n}\n[/block]\n<div align=\"right\"><a href=\"#top\">top</a></div>","excerpt":"<a name=\"top\"></a>","slug":"apps-on-the-cgc","type":"basic","title":"Apps on the CGC"}

Apps on the CGC

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The CGC offers a repository of publicly available apps suitable for many different types of data analysis. [block:callout] { "type": "warning", "title": "On this page:", "body": "* [Overview](#overview)\n* [Accessing Public Apps](#accessing)" } [/block] <a name="overview"></a> ##Overview Apps include both **tools** (individual bioinformatics utilities) and **workflows** (chains or pipelines of connected tools). The publicly available apps are maintained by the CGC bioinformatics team to represent the latest tool versions. They can be fully modified using the [tool editor](doc:edit-a-tool) and the [workflow editor](doc:the-pipeline-editor). The CGC public apps are hosted in a gallery for you to locate them easily. Once you access the public apps gallery, you can: 1. [Search for a specific app](doc:search-for-an-app). 2. Explore all apps. 3. View featured apps. [block:image] { "images": [ { "image": [ "https://files.readme.io/9259974-cgc-pub-apps1.jpg", "cgc-pub-apps1.jpg", 1073, 986, "#ededed" ], "border": true } ] } [/block] <div align="right"><a href="#top">top</a></div> <a name="accessing"></a> ##Accessing Public Apps To view the public apps gallery, click **Public Apps** in the top navigation bar. [block:image] { "images": [ { "image": [ "https://files.readme.io/bef90d8-access-pub-apps.jpg", "access-pub-apps.jpg", 680, 409, "#3461a5" ], "border": true } ] } [/block] <div align="right"><a href="#top">top</a></div>