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Hi CGC Team,
I am planning to use the tissue slides and the gene expression data from TCGA. Therefore I need the connections between the two units. Since the TCGA barcodes sometimes don't match (e.g. if the portion number is different), I want to use the metadata to get this information.

I created the query for it and tried to download the connections. But if I export the corresponding file, I can only download up to 3000 lines. That would be enough, but if I drop all duplicates, I only have 100 lines.

Is there a way to download the hole table directly from the query?

Best regards,
Lena