{"__v":12,"_id":"56fd96a5e7f3080e008e3ec2","category":{"__v":92,"_id":"55faf9aa17b9d00d00969f49","pages":["56312d239ead230d00a188f2","56312e0d82d96a0d00b0fb08","56315777fc94aa0d00e9b553","56315b779ead230d00a1894a","5631657c9c25801700dac34f","56317884fc94aa0d00e9b586","56318386c3b04b0d00ba9bb9","563240ccdcc27a170082363b","563240dfbddb091700ad5e82","563240edfe9acd1900cc1d10","56324504fa40240d007c8d5f","56324b30c3b04b0d00ba9c96","563273ae45f2cb0d006be3fa","563273c08c9cda0d0025266d","563273cc38f8aa0d00d30f55","563273d838f8aa0d00d30f59","5632740945f2cb0d006be3fc","56327411df556c0d00cd0905","5632741b8c9cda0d0025266f","563274ea10b6040d008793d8","5632757cdf556c0d00cd0908","563275b710b6040d008793da","563275f938f8aa0d00d30f60","5632762fb904a10d0032f6fc","5632767110b6040d008793dd","563276c0b904a10d0032f700","5632770162c48a0d00334d53","5632843d8c9cda0d00252698","5632846e62c48a0d00334d78","56328a7e49e16d0d00122420","56328aaf49e16d0d00122425","56328b2238f8aa0d00d30f88","56328b6c8c9cda0d002526a2","56328c0710b6040d008793ff","56328c3710b6040d00879401","56328c5938f8aa0d00d30f8c","56328c90b904a10d0032f722","56328cc449e16d0d0012242a","56328ce68c9cda0d002526a8","56328d1338f8aa0d00d30f8e","56328d5810b6040d00879407","56328d7cdf556c0d00cd092f","56328d9a10b6040d00879409","56328db438f8aa0d00d30f92","56328dd762c48a0d00334d8b","56328df649e16d0d0012242d","56328e1edf556c0d00cd0931","56328e4662c48a0d00334d8e","56328e5edf556c0d00cd0933","56328e8f8c9cda0d002526ab","56328eb3b904a10d0032f72a","56328edb38f8aa0d00d30f95","56328ef210b6040d0087940d","56328f148c9cda0d002526ad","56328f2962c48a0d00334d90","56328f54b904a10d0032f72c","56328f6c38f8aa0d00d30f98","56328f858c9cda0d002526af","56328fae62c48a0d00334d95","56328fd838f8aa0d00d30f9c","5637f069ee0ee60d0024ec18","5641ffaa9417b40d00c0fc35","564355240d9748190079dea9","5644cfeb2c74cf1900da4831","56450f856b0ca50d00f6bd8f","56706537cbb2fb0d00f7c7dd","567065bc3d29830d00376213","56706fc2cbb2fb0d00f7c87e","568bf5a1e662f40d00eee866","568c0699e662f40d00eee881","568cff0274c77f2d00d56d51","568d10f58602880d001ce277","568d2abc37b636250036b904","568d343413c5ad0d00b34efb","568d593a8602880d001ce2d3","568e64135e12fb0d00325160","568e66f05e12fb0d00325162","568e78aa5e12fb0d0032517a","569433cfd8c04d1700e5ae0c","56943723d8c04d1700e5ae14","5694393b3e9d080d00f0655d","5694e6cf953b810d008f91bc","5694f301c5c5ce0d00058e68","569502ef9797fa1900f704e7","5695063bcaa32519009c40b3","569511cccaa32519009c40d9","569557e2fcb1032d0089dfe2","569562fefcb1032d0089dfee","56956428fe18811700c9c058","569639b87596a90d0014e5a3","56a90197e590350d004b5103","56a9021e9ec7660d002e08c2"],"project":"55faf11ba62ba1170021a9a7","version":"55faf11ba62ba1170021a9aa","sync":{"url":"","isSync":false},"reference":true,"createdAt":"2015-09-17T17:34:34.937Z","from_sync":false,"order":26,"slug":"api","title":"API Reference"},"parentDoc":null,"project":"55faf11ba62ba1170021a9a7","user":"5613e4f8fdd08f2b00437620","version":{"__v":35,"_id":"55faf11ba62ba1170021a9aa","project":"55faf11ba62ba1170021a9a7","createdAt":"2015-09-17T16:58:03.490Z","releaseDate":"2015-09-17T16:58:03.490Z","categories":["55faf11ca62ba1170021a9ab","55faf8f4d0e22017005b8272","55faf91aa62ba1170021a9b5","55faf929a8a7770d00c2c0bd","55faf932a8a7770d00c2c0bf","55faf94b17b9d00d00969f47","55faf958d0e22017005b8274","55faf95fa8a7770d00c2c0c0","55faf96917b9d00d00969f48","55faf970a8a7770d00c2c0c1","55faf98c825d5f19001fa3a6","55faf99aa62ba1170021a9b8","55faf99fa62ba1170021a9b9","55faf9aa17b9d00d00969f49","55faf9b6a8a7770d00c2c0c3","55faf9bda62ba1170021a9ba","5604570090ee490d00440551","5637e8b2fbe1c50d008cb078","5649bb624fa1460d00780add","5671974d1b6b730d008b4823","5671979d60c8e70d006c9760","568e8eef70ca1f0d0035808e","56d0a2081ecc471500f1795e","56d4a0adde40c70b00823ea3","56d96b03dd90610b00270849","56fbb83d8f21c817002af880","573c811bee2b3b2200422be1","576bc92afb62dd20001cda85","5771811e27a5c20e00030dcd","5785191af3a10c0e009b75b0","57bdf84d5d48411900cd8dc0","57ff5c5dc135231700aed806","5804caf792398f0f00e77521","58458b4fba4f1c0f009692bb","586d3c287c6b5b2300c05055"],"is_deprecated":false,"is_hidden":false,"is_beta":true,"is_stable":true,"codename":"","version_clean":"1.0.0","version":"1.0"},"updates":[],"next":{"pages":[],"description":""},"createdAt":"2016-03-31T21:29:09.165Z","link_external":false,"link_url":"","githubsync":"","sync_unique":"","hidden":false,"api":{"examples":{"codes":[]},"results":{"codes":[]},"settings":"","auth":"required","params":[],"url":""},"isReference":true,"order":74,"body":"[block:callout]\n{\n  \"type\": \"danger\",\n  \"body\": \"Note that this is a fully-functional early release feature. The call, and the format of the information returned is subject to change.\",\n  \"title\": \"Early release status\"\n}\n[/block]\nThis call returns execution details of the specified task. The task is referred to by its ID, which you can obtain by making the [call to list all tasks you can access](list-tasks-you-can-access). \n\nThe call breaks down the information into the task's distinct jobs. A job is a single subprocess carried out in a task.\n\nThe information returned by this call is broadly similar to that which can be found in the [task stats and logs provided on the CGC](review-task-page). \n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"https://cgc-api.sbgenomics.com/v2/tasks/{task_id}/execution_details\",\n      \"language\": \"text\",\n      \"name\": \"Path\"\n    }\n  ]\n}\n[/block]\n The task execution details include the following information:\n\n  * The name of the command line job that executed\n  * The start time of the job\n  * End time of the job (if it completed)\n  * The status of the job (`DONE`, `FAILED`, or `RUNNING`)\n  * Information on the computational instance that the job was run on, including the provider ID, the type of instance used and the cloud service provider\n  * A link that can be used to download the standard error logs for the job\n  * SHA hash of the Docker image ('checksum')\n\n##Request\n\n###Example request\n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"GET /v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/execution_details HTTP/1.1\\nHost: cgc-api.sbgenomics.com\\nX-SBG-Auth-Token: 3259c50e1ac5426ea9t6573259740f74\\n\",\n      \"language\": \"http\",\n      \"name\": null\n    },\n    {\n      \"code\": \"curl -s -H \\\"X-SBG-Auth-Token: 3259c50e1ac5426ea9t6573259740f74\\\" -H \\\"content-type: application/json\\\" -X GET \\\"https://api.sbgenomics.com/v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/execution_details\\\"\",\n      \"language\": \"curl\",\n      \"name\": \"cURL\"\n    }\n  ],\n  \"sidebar\": true\n}\n[/block]\n\n###Header Fields\n[block:parameters]\n{\n  \"data\": {\n    \"h-0\": \"Name\",\n    \"h-1\": \"Description\",\n    \"0-0\": \"X-SBG-Auth-Token\\nrequired\",\n    \"0-1\": \"Your CGC [authentication token](doc:get-your-authentication-token).\",\n    \"h-2\": \"\"\n  },\n  \"cols\": 2,\n  \"rows\": 1\n}\n[/block]\n\n###Path parameters\n[block:parameters]\n{\n  \"data\": {\n    \"0-0\": \"`task_id`\\n*required*\",\n    \"h-0\": \"Name\",\n    \"h-1\": \"Description\",\n    \"0-1\": \"The ID of the task you are querying\"\n  },\n  \"cols\": 2,\n  \"rows\": 1\n}\n[/block]\n\n###Query parameters\n[block:parameters]\n{\n  \"data\": {\n    \"h-0\": \"Name\",\n    \"h-1\": \"Data type\",\n    \"h-2\": \"Description\",\n    \"0-0\": \"fields\",\n    \"0-1\": \"string\",\n    \"0-2\": \"Selector specifying a subset of fields to include in the response.\"\n  },\n  \"cols\": 3,\n  \"rows\": 1\n}\n[/block]\n\n##Response\n\n[See a list of CGC-specific response codes that may be contained in the body of the response.](doc:api-status-codes) \n\n###Example response body\n[block:code]\n{\n  \"codes\": [\n    {\n      \"code\": \"{\\n\\t\\\"href\\\": \\\"https://cgc-api.sbgenomics.com/v2/tasks/a2bb05fd-46db-4035-a270-c88297fb2b7c/execution_details\\\",\\n\\t\\\"start_time\\\": \\\"2016-03-23T14:41:59Z\\\",\\n\\t\\\"status\\\": \\\"RUNNING\\\",\\n\\t\\\"message\\\": \\\"Waiting for computational resources...\\\",\\n\\t\\\"jobs\\\": [{\\n\\t\\t\\\"name\\\": \\\"SBG_FASTQ_Quality_Detector/0\\\",\\n\\t\\t\\\"start_time\\\": \\\"2016-03-23T15:12:09Z\\\",\\n\\t\\t\\\"end_time\\\": \\\"2016-03-23T15:12:45Z\\\",\\n\\t\\t\\\"status\\\": \\\"DONE\\\",\\n\\t\\t\\\"command_line\\\": \\\"python /opt/sbg_fastq_quality_scale_detector.py --fastq /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/C18-146.fastq\\\",\\n\\t\\t\\\"instance\\\": {\\n\\t\\t\\t\\\"id\\\": \\\"i-e3f1af60\\\",\\n\\t\\t\\t\\\"type\\\": \\\"c3.2xlarge\\\",\\n\\t\\t\\t\\\"provider\\\": \\\"AWS\\\"\\n\\t\\t},\\n    \\\"docker\\\": {\\n      \\\"checksum\\\": \\\"ff9c104102ff5cdec283210ef0dc4a8347136aa9e77661803165da780958d7a5\\\"\\n    },\\n\\t\\t\\\"logs\\\": {\\n\\t\\t\\t\\\"stderr\\\": \\\"https://cgc-api.sbgenomics.com/v2/files/56e2b26760c283d0531b21f1/download_info\\\"\\n\\t\\t}\\n\\t}, {\\n\\t\\t\\\"name\\\": \\\"BWA_MEM_Bundle\\\",\\n\\t\\t\\\"start_time\\\": \\\"2016-03-23T15:14:38Z\\\",\\n\\t\\t\\\"status\\\": \\\"RUNNING\\\",\\n\\t\\t\\\"command_line\\\": \\\"python /opt/scripts/bwa_mem_bundle.py bwa mem -t 8 -M --output_format SortedBAM --remove_dups MarkDuplicates --total_memory 15 --filter_sec -R ':::at:::RG\\\\tID:1\\\\tLB:hg19\\\\tPL:IonTorrent\\\\tPU:C18-146\\\\tSM:E18495-pool40a-L2888' /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/human_g1k_v37_decoy.fasta /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_SBG_FASTQ_Quality_Converter_0_s/C18-146.std.fastq\\\",\\n\\t\\t\\\"instance\\\": {\\n\\t\\t\\t\\\"id\\\": \\\"i-e3f1af60\\\",\\n\\t\\t\\t\\\"type\\\": \\\"c3.2xlarge\\\",\\n\\t\\t\\t\\\"provider\\\": \\\"AWS\\\"\\n\\t\\t},\\n    \\\"docker\\\": {\\n      \\\"checksum\\\": \\\"559257ac23e82b5d7115c63101297b8b44dd8962a11688c22e1cb2280fed3947\\\"\\n    },\\n\\t\\t\\\"logs\\\": {\\n\\t\\t\\t\\\"stderr\\\": null\\n\\t\\t}\\n\\t}, {\\n\\t\\t\\\"name\\\": \\\"FastQC/0\\\",\\n\\t\\t\\\"start_time\\\": \\\"2016-03-23T15:12:08Z\\\",\\n\\t\\t\\\"end_time\\\": \\\"2016-03-23T15:13:14Z\\\",\\n\\t\\t\\\"status\\\": \\\"DONE\\\",\\n\\t\\t\\\"command_line\\\": \\\"fastqc --noextract --outdir . --quiet --threads 4 /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/C18-146.fastq\\\",\\n\\t\\t\\\"instance\\\": {\\n\\t\\t\\t\\\"id\\\": \\\"i-e3f1af60\\\",\\n\\t\\t\\t\\\"type\\\": \\\"c3.2xlarge\\\",\\n\\t\\t\\t\\\"provider\\\": \\\"AWS\\\"\\n\\t\\t},\\n    \\\"docker\\\": {\\n      \\\"checksum\\\": \\\"b5a75cf9ae8b0b0e5b465ffb037bbd909205bbc646225cf24564e3132fca5ae3\\\"\\n    },\\n\\t\\t\\\"logs\\\": {\\n\\t\\t\\t\\\"stderr\\\": \\\"https://cgc-api.sbgenomics.com/v2/files/56f2b28560b2e9392b02825f/download_info\\\"\\n\\t\\t}\\n\\t}, {\\n\\t\\t\\\"name\\\": \\\"SBG_FASTQ_Quality_Converter/0\\\",\\n\\t\\t\\\"start_time\\\": \\\"2016-03-23T15:12:54Z\\\",\\n\\t\\t\\\"end_time\\\": \\\"2016-03-23T15:13:26Z\\\",\\n\\t\\t\\\"status\\\": \\\"DONE\\\",\\n\\t\\t\\\"command_line\\\": \\\"python /opt/sbg_fastq_quality_converter.py -f /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_SBG_FASTQ_Quality_Detector_0_s/C18-146.fastq -s auto\\\",\\n\\t\\t\\\"instance\\\": {\\n\\t\\t\\t\\\"id\\\": \\\"i-e3f1af60\\\",\\n\\t\\t\\t\\\"type\\\": \\\"c3.2xlarge\\\",\\n\\t\\t\\t\\\"provider\\\": \\\"AWS\\\"\\n\\t\\t},\\n    \\\"docker\\\": {\\n      \\\"checksum\\\": \\\"f657c437fu56986eeb33b69cbde52252a330a224957c48fec74499a71eb4bb54\\\"\\n    },\\n\\t\\t\\\"logs\\\": {\\n\\t\\t\\t\\\"stderr\\\": \\\"https://cgc-api.sbgenomics.com/v2/files/56f2b29460b23d83c6735c9d/download_info\\\"\\n\\t\\t}\\n\\t}, {\\n\\t\\t\\\"name\\\": \\\"SBG_Html2b64/0\\\",\\n\\t\\t\\\"start_time\\\": \\\"2016-03-23T15:13:25Z\\\",\\n\\t\\t\\\"end_time\\\": \\\"2016-03-23T15:13:58Z\\\",\\n\\t\\t\\\"status\\\": \\\"DONE\\\",\\n\\t\\t\\\"command_line\\\": \\\"python /opt/sbg_html_to_b64.py --input /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_FastQC_0_s/C18-146_fastqc.zip\\\",\\n\\t\\t\\\"instance\\\": {\\n\\t\\t\\t\\\"id\\\": \\\"i-e3f1af60\\\",\\n\\t\\t\\t\\\"type\\\": \\\"c3.2xlarge\\\",\\n\\t\\t\\t\\\"provider\\\": \\\"AWS\\\"\\n\\t\\t},\\n    \\\"docker\\\": {\\n      \\\"checksum\\\": \\\"a657c637fc53126eeb33b69cbde52252a330a224795c48fec74499a71eb4dd54\\\"\\n    },\\n\\t\\t\\\"logs\\\": {\\n\\t\\t\\t\\\"stderr\\\": \\\"https://cgc-api.sbgenomics.com/v2/files/56f2b2b360b283d0531b220e/download_info\\\"\\n\\t\\t}\\n\\t}]\\n}\",\n      \"language\": \"json\"\n    }\n  ],\n  \"sidebar\": true\n}\n[/block]","excerpt":"/tasks/{task_id}/execution_details","slug":"get-task-execution-details","type":"get","title":"Get task execution details"}

getGet task execution details

/tasks/{task_id}/execution_details

[block:callout] { "type": "danger", "body": "Note that this is a fully-functional early release feature. The call, and the format of the information returned is subject to change.", "title": "Early release status" } [/block] This call returns execution details of the specified task. The task is referred to by its ID, which you can obtain by making the [call to list all tasks you can access](list-tasks-you-can-access). The call breaks down the information into the task's distinct jobs. A job is a single subprocess carried out in a task. The information returned by this call is broadly similar to that which can be found in the [task stats and logs provided on the CGC](review-task-page). [block:code] { "codes": [ { "code": "https://cgc-api.sbgenomics.com/v2/tasks/{task_id}/execution_details", "language": "text", "name": "Path" } ] } [/block] The task execution details include the following information: * The name of the command line job that executed * The start time of the job * End time of the job (if it completed) * The status of the job (`DONE`, `FAILED`, or `RUNNING`) * Information on the computational instance that the job was run on, including the provider ID, the type of instance used and the cloud service provider * A link that can be used to download the standard error logs for the job * SHA hash of the Docker image ('checksum') ##Request ###Example request [block:code] { "codes": [ { "code": "GET /v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/execution_details HTTP/1.1\nHost: cgc-api.sbgenomics.com\nX-SBG-Auth-Token: 3259c50e1ac5426ea9t6573259740f74\n", "language": "http", "name": null }, { "code": "curl -s -H \"X-SBG-Auth-Token: 3259c50e1ac5426ea9t6573259740f74\" -H \"content-type: application/json\" -X GET \"https://api.sbgenomics.com/v2/tasks/08c5ce64-1551-4b7d-b054-63a1517bc7bb/execution_details\"", "language": "curl", "name": "cURL" } ], "sidebar": true } [/block] ###Header Fields [block:parameters] { "data": { "h-0": "Name", "h-1": "Description", "0-0": "X-SBG-Auth-Token\nrequired", "0-1": "Your CGC [authentication token](doc:get-your-authentication-token).", "h-2": "" }, "cols": 2, "rows": 1 } [/block] ###Path parameters [block:parameters] { "data": { "0-0": "`task_id`\n*required*", "h-0": "Name", "h-1": "Description", "0-1": "The ID of the task you are querying" }, "cols": 2, "rows": 1 } [/block] ###Query parameters [block:parameters] { "data": { "h-0": "Name", "h-1": "Data type", "h-2": "Description", "0-0": "fields", "0-1": "string", "0-2": "Selector specifying a subset of fields to include in the response." }, "cols": 3, "rows": 1 } [/block] ##Response [See a list of CGC-specific response codes that may be contained in the body of the response.](doc:api-status-codes) ###Example response body [block:code] { "codes": [ { "code": "{\n\t\"href\": \"https://cgc-api.sbgenomics.com/v2/tasks/a2bb05fd-46db-4035-a270-c88297fb2b7c/execution_details\",\n\t\"start_time\": \"2016-03-23T14:41:59Z\",\n\t\"status\": \"RUNNING\",\n\t\"message\": \"Waiting for computational resources...\",\n\t\"jobs\": [{\n\t\t\"name\": \"SBG_FASTQ_Quality_Detector/0\",\n\t\t\"start_time\": \"2016-03-23T15:12:09Z\",\n\t\t\"end_time\": \"2016-03-23T15:12:45Z\",\n\t\t\"status\": \"DONE\",\n\t\t\"command_line\": \"python /opt/sbg_fastq_quality_scale_detector.py --fastq /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/C18-146.fastq\",\n\t\t\"instance\": {\n\t\t\t\"id\": \"i-e3f1af60\",\n\t\t\t\"type\": \"c3.2xlarge\",\n\t\t\t\"provider\": \"AWS\"\n\t\t},\n \"docker\": {\n \"checksum\": \"ff9c104102ff5cdec283210ef0dc4a8347136aa9e77661803165da780958d7a5\"\n },\n\t\t\"logs\": {\n\t\t\t\"stderr\": \"https://cgc-api.sbgenomics.com/v2/files/56e2b26760c283d0531b21f1/download_info\"\n\t\t}\n\t}, {\n\t\t\"name\": \"BWA_MEM_Bundle\",\n\t\t\"start_time\": \"2016-03-23T15:14:38Z\",\n\t\t\"status\": \"RUNNING\",\n\t\t\"command_line\": \"python /opt/scripts/bwa_mem_bundle.py bwa mem -t 8 -M --output_format SortedBAM --remove_dups MarkDuplicates --total_memory 15 --filter_sec -R '@RG\\tID:1\\tLB:hg19\\tPL:IonTorrent\\tPU:C18-146\\tSM:E18495-pool40a-L2888' /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/human_g1k_v37_decoy.fasta /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_SBG_FASTQ_Quality_Converter_0_s/C18-146.std.fastq\",\n\t\t\"instance\": {\n\t\t\t\"id\": \"i-e3f1af60\",\n\t\t\t\"type\": \"c3.2xlarge\",\n\t\t\t\"provider\": \"AWS\"\n\t\t},\n \"docker\": {\n \"checksum\": \"559257ac23e82b5d7115c63101297b8b44dd8962a11688c22e1cb2280fed3947\"\n },\n\t\t\"logs\": {\n\t\t\t\"stderr\": null\n\t\t}\n\t}, {\n\t\t\"name\": \"FastQC/0\",\n\t\t\"start_time\": \"2016-03-23T15:12:08Z\",\n\t\t\"end_time\": \"2016-03-23T15:13:14Z\",\n\t\t\"status\": \"DONE\",\n\t\t\"command_line\": \"fastqc --noextract --outdir . --quiet --threads 4 /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/C18-146.fastq\",\n\t\t\"instance\": {\n\t\t\t\"id\": \"i-e3f1af60\",\n\t\t\t\"type\": \"c3.2xlarge\",\n\t\t\t\"provider\": \"AWS\"\n\t\t},\n \"docker\": {\n \"checksum\": \"b5a75cf9ae8b0b0e5b465ffb037bbd909205bbc646225cf24564e3132fca5ae3\"\n },\n\t\t\"logs\": {\n\t\t\t\"stderr\": \"https://cgc-api.sbgenomics.com/v2/files/56f2b28560b2e9392b02825f/download_info\"\n\t\t}\n\t}, {\n\t\t\"name\": \"SBG_FASTQ_Quality_Converter/0\",\n\t\t\"start_time\": \"2016-03-23T15:12:54Z\",\n\t\t\"end_time\": \"2016-03-23T15:13:26Z\",\n\t\t\"status\": \"DONE\",\n\t\t\"command_line\": \"python /opt/sbg_fastq_quality_converter.py -f /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_SBG_FASTQ_Quality_Detector_0_s/C18-146.fastq -s auto\",\n\t\t\"instance\": {\n\t\t\t\"id\": \"i-e3f1af60\",\n\t\t\t\"type\": \"c3.2xlarge\",\n\t\t\t\"provider\": \"AWS\"\n\t\t},\n \"docker\": {\n \"checksum\": \"f657c437fu56986eeb33b69cbde52252a330a224957c48fec74499a71eb4bb54\"\n },\n\t\t\"logs\": {\n\t\t\t\"stderr\": \"https://cgc-api.sbgenomics.com/v2/files/56f2b29460b23d83c6735c9d/download_info\"\n\t\t}\n\t}, {\n\t\t\"name\": \"SBG_Html2b64/0\",\n\t\t\"start_time\": \"2016-03-23T15:13:25Z\",\n\t\t\"end_time\": \"2016-03-23T15:13:58Z\",\n\t\t\"status\": \"DONE\",\n\t\t\"command_line\": \"python /opt/sbg_html_to_b64.py --input /sbgenomics/Projects/e88733b6-3a43-44ff-b882-9f75d02f397c/a2cc05fd-46db-4035-a270-c66297fb2b7c/whole-exome-sequencing-gatk-2-3-9-lite_FastQC_0_s/C18-146_fastqc.zip\",\n\t\t\"instance\": {\n\t\t\t\"id\": \"i-e3f1af60\",\n\t\t\t\"type\": \"c3.2xlarge\",\n\t\t\t\"provider\": \"AWS\"\n\t\t},\n \"docker\": {\n \"checksum\": \"a657c637fc53126eeb33b69cbde52252a330a224795c48fec74499a71eb4dd54\"\n },\n\t\t\"logs\": {\n\t\t\t\"stderr\": \"https://cgc-api.sbgenomics.com/v2/files/56f2b2b360b283d0531b220e/download_info\"\n\t\t}\n\t}]\n}", "language": "json" } ], "sidebar": true } [/block]